Showing posts with label biology. Show all posts
Showing posts with label biology. Show all posts

Tuesday, May 29, 2007

cancer and the cell cycle

Last Friday I came to the Max Planck Instute for Cell Biology, at the other side of Dresden, to attend a series of seminars including one from a colleague and friend of mine, Babis Hatzikirou, about the cell cycle.

The classical view on the cell cycle can be seen in this picture that I took from Babis's presentation (and which I suspect he took from somewhere else :)):
This is quite interesting although not precisely research news. Most of the cell cycle is of course devoted to interphase and only a minority of the time (assuming that the cell is not in arrest mode) is devoted to create a copy of itself (through mitosis and cytokinesis). The cell cycle is controlled by a finely tuned balance of proteins cdc2-cdc13 and a number of checkpoints make sure that before changing the phase of the cell cycle everything is in order. These checkpoints and their associated proteins (such as the famous TP53) are quite critical to prevent tumour formation as they impede the growth of cells that need DNA repair.

Tuesday, April 17, 2007

The laws of biology

The side effect of having spending so much time traveling these last months is that I have this stack of Nature and Science journals (I switched from the former to the latter a month ago to see the difference) which I am going through quite slowly.

In a Nature from the 7th of February there is an interesting essay about the clash of cultures between biologists and physicists working on biological topics written by a physicist from MIT (good to know where the bias will come from). Physicists have a long tradition of studying an (increasing) range of phenomena and producing theoretical models that characterise as many of those phenomena as possible. These are what are called the laws of physics. The question is if biology can have also models and laws that represent biological phenomena.

Although there are some (fairly generic and neat) biological laws (thing of Darwin's evolution and Mendel's genetics) most biologists seem to be more interested in fact collecting than in putting the available information in the form of theoretical models and universal laws of biology. The physicists (and mathematicians) coming to the field have not much knowledge in how the facts are collected (which it is easy to imagine as the source of many frustrations) but a deep interest in integrating those facts into models (especially when it involves using their favourite tools such as phase transitions, fractal analysis, power laws or networks). It remains to be seen if (in the view of the author) these general laws are possible at all and if (not my view but at least my question) the tools that were useful in physics will be that useful in biology (which does not mean they could at the very least, constitute a good starting point).